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12  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL4_THET2 (Q72I05)

Summary

This is the summary of UniProt entry RL4_THET2 (Q72I05).

Description: 50S ribosomal protein L4
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (NCBI taxonomy ID 262724)
View Pfam proteome data.
Length: 205 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L4 14 200
disorder n/a 45 48
disorder n/a 55 56
low_complexity n/a 78 86

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q72I05. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MYQIPVLSPS GRRELAADLP AEINPHLLWE VVRWQLAKRR RGTASTKTRG
50
51
EVAYSGRKIW PQKHTGRARH GDIGAPIFVG GGVVFGPKPR DYSYTLPKKV
100
101
RKKGLAMAVA DRAREGKLLL VEAFAGVNGK TKEFLAWAKE AGLDGSESVL
150
151
LVTGNELVRR AARNLPWVVT LAPEGLNVYD IVRTERLVMD LDAWEVFQNR
200
201
IGGEA                                                 
205
 

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Checksums:
CRC64:FC50A700F8CBC324
MD5:ccd0ca85b5cfb15e182d2322a87e00a8

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L4 14 - 197 1VSA D 14 - 197 Jmol AstexViewer SPICE
1VSP D 14 - 197 Jmol AstexViewer SPICE
14 - 200 3D5B F 19 - 205 Jmol AstexViewer SPICE
3D5D F 19 - 205 Jmol AstexViewer SPICE
3F1F F 19 - 205 Jmol AstexViewer SPICE
3F1H F 19 - 205 Jmol AstexViewer SPICE
3MRZ E 19 - 205 Jmol AstexViewer SPICE
3MS1 E 19 - 205 Jmol AstexViewer SPICE
3PYO E 19 - 205 Jmol AstexViewer SPICE
3PYR E 19 - 205 Jmol AstexViewer SPICE
3PYT E 19 - 205 Jmol AstexViewer SPICE
3PYV E 19 - 205 Jmol AstexViewer SPICE