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12  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL5_THET2 (Q72I16)

Summary

This is the summary of UniProt entry RL5_THET2 (Q72I16).

Description: 50S ribosomal protein L5
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (NCBI taxonomy ID 262724)
View Pfam proteome data.
Length: 182 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L5 27 83
Pfam A Ribosomal_L5_C 87 181

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q72I16. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPLDLALKRK YYEEVRPELI RRFGYQNVWE VPRLEKVVIN QGLGEAKEDA
50
51
RILEKAAQEL ALITGQKPAV TRAKKSISNF KLRKGMPIGL RVTLRRDRMW
100
101
IFLEKLLNVA LPRIRDFRGL NPNSFDGRGN YNLGLREQLI FPEITYDMVD
150
151
ALRGMDIAVV TTAETDEEAR ALLELLGFPF RK                   
182
 

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Checksums:
CRC64:C3A8E0CFD884EEEA
MD5:e4d5081ce615fd5a3dfe3e6c70e63df0

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L5 27 - 83 1VSA E 27 - 83 Jmol AstexViewer SPICE
1VSP E 27 - 83 Jmol AstexViewer SPICE
3D5B G 27 - 83 Jmol AstexViewer SPICE
3D5D G 27 - 83 Jmol AstexViewer SPICE
3F1F G 27 - 83 Jmol AstexViewer SPICE
3F1H G 27 - 83 Jmol AstexViewer SPICE
3MRZ F 27 - 83 Jmol AstexViewer SPICE
3MS1 F 27 - 83 Jmol AstexViewer SPICE
3PYO F 27 - 83 Jmol AstexViewer SPICE
3PYR F 27 - 83 Jmol AstexViewer SPICE
3PYT F 27 - 83 Jmol AstexViewer SPICE
3PYV F 27 - 83 Jmol AstexViewer SPICE
Ribosomal_L5_C 87 - 181 1VSA E 87 - 181 Jmol AstexViewer SPICE
1VSP E 87 - 181 Jmol AstexViewer SPICE
3D5B G 87 - 181 Jmol AstexViewer SPICE
3D5D G 87 - 181 Jmol AstexViewer SPICE
3F1F G 87 - 181 Jmol AstexViewer SPICE
3F1H G 87 - 181 Jmol AstexViewer SPICE
3MRZ F 87 - 181 Jmol AstexViewer SPICE
3MS1 F 87 - 181 Jmol AstexViewer SPICE
3PYO F 87 - 181 Jmol AstexViewer SPICE
3PYR F 87 - 181 Jmol AstexViewer SPICE
3PYT F 87 - 181 Jmol AstexViewer SPICE
3PYV F 87 - 181 Jmol AstexViewer SPICE