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12  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL18_THET2 (Q72I20)

Summary

This is the summary of UniProt entry RL18_THET2 (Q72I20).

Description: 50S ribosomal protein L18
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (NCBI taxonomy ID 262724)
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Length: 112 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L18p 2 112
low_complexity n/a 9 20
low_complexity n/a 50 59

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q72I20. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARLTAYERR KFRVRNRIKR TGRLRLSVFR SLKHIYAQII DDEKGVTLVS
50
51
ASSLALKLKG NKTEVARQVG RALAEKALAL GIKQVAFDRG PYKYHGRVKA
100
101
LAEGAREGGL EF                                         
112
 

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Checksums:
CRC64:EA2AB016AEDB0638
MD5:e2cb6e0cfdfb54d6b057b457c87a876b

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L18p 11 - 108 3D5B S 11 - 108 Jmol AstexViewer SPICE
3D5D S 11 - 108 Jmol AstexViewer SPICE
3F1F S 11 - 108 Jmol AstexViewer SPICE
3F1H S 11 - 108 Jmol AstexViewer SPICE
3MRZ O 11 - 108 Jmol AstexViewer SPICE
3MS1 O 11 - 108 Jmol AstexViewer SPICE
3PYO O 11 - 108 Jmol AstexViewer SPICE
3PYR O 11 - 108 Jmol AstexViewer SPICE
3PYT O 11 - 108 Jmol AstexViewer SPICE
3PYV O 11 - 108 Jmol AstexViewer SPICE
7 - 112 1VSA M 7 - 112 Jmol AstexViewer SPICE
1VSP M 7 - 112 Jmol AstexViewer SPICE