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12  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL13_THET2 (Q72IN1)

Summary

This is the summary of UniProt entry RL13_THET2 (Q72IN1).

Description: 50S ribosomal protein L13
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (NCBI taxonomy ID 262724)
View Pfam proteome data.
Length: 140 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L13 13 140
disorder n/a 102 104
disorder n/a 123 140

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q72IN1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKTYVPKQVE PRWVLIDAEG KTLGRLATKI ATLLRGKHRP DWTPNVAMGD
50
51
FVVVVNADKI RVTGKKLEQK IYTRYSGYPG GLKKIPLEKM LATHPERVLE
100
101
HAVKGMLPKG PLGRRLFKRL KVYAGPDHPH QAQRPEKLEV           
140
 

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Checksums:
CRC64:657212AE35E6F502
MD5:393eb61a43858918b62ac34c60acf34f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L13 13 - 138 1VSA H 36 - 161 Jmol AstexViewer SPICE
1VSP H 36 - 161 Jmol AstexViewer SPICE
3D5B N 36 - 161 Jmol AstexViewer SPICE
3D5D N 36 - 161 Jmol AstexViewer SPICE
3F1F N 36 - 161 Jmol AstexViewer SPICE
3F1H N 36 - 161 Jmol AstexViewer SPICE
3MRZ J 36 - 161 Jmol AstexViewer SPICE
3MS1 J 36 - 161 Jmol AstexViewer SPICE
3PYO J 36 - 161 Jmol AstexViewer SPICE
3PYR J 36 - 161 Jmol AstexViewer SPICE
3PYT J 36 - 161 Jmol AstexViewer SPICE
3PYV J 36 - 161 Jmol AstexViewer SPICE