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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DDL_BACAN (Q81Q29)

Summary

This is the summary of UniProt entry DDL_BACAN (Q81Q29).

Description: D-alanine--D-alanine ligase EC=6.3.2.4
Source organism: Bacillus anthracis (NCBI taxonomy ID 1392)
View Pfam proteome data.
Length: 304 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Dala_Dala_lig_N 1 52
Pfam A Dala_Dala_lig_N 41 84
Pfam A Dala_Dala_lig_C 101 293

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q81Q29. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MRIGVIMGGV SSEKQVSIMT GNEMIANLDK NKYEIVPITL NEKMDLIEKA
50
51
KDIDFALLAL HGKYGEDGTV QGTLESLGIP YSGSNMLSSG ICMDKNISKK
100
101
ILRYEGIETP DWIELTKMED LNFDELDKLG FPLVVKPNSG GSSVGVKIVY
150
151
DKDELISMLE TVFEWDSEVV IEKYIKGEEI TCSIFDGKQL PIISIRHAAE
200
201
FFDYNAKYDD ASTIEEVIEL PAELKERVNK ASLACYKALK CSVYARVDMM
250
251
VKDGIPYVME VNTLPGMTQA SLLPKSADAA GIHYSKLLDM IIETSLRVRK
300
301
EEGF                                                  
304
 

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Checksums:
CRC64:FB85F1B59BC2B9B2
MD5:25b712c073d3fbc9c49798d198af0d2d

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Dala_Dala_lig_C 101 - 293 3R23 A 101 - 293 Jmol AstexViewer SPICE
B 101 - 293 Jmol AstexViewer SPICE
3R5X A 101 - 293 Jmol AstexViewer SPICE
B 101 - 293 Jmol AstexViewer SPICE
C 101 - 293 Jmol AstexViewer SPICE
D 101 - 293 Jmol AstexViewer SPICE
Dala_Dala_lig_N 1 - 52 3R23 A 1 - 52 Jmol AstexViewer SPICE
B 1 - 52 Jmol AstexViewer SPICE
3R5X A 313 - 52 Jmol AstexViewer SPICE
B 1 - 52 Jmol AstexViewer SPICE
C 1 - 52 Jmol AstexViewer SPICE
D 1 - 52 Jmol AstexViewer SPICE
41 - 84 3R23 A 41 - 84 Jmol AstexViewer SPICE
B 41 - 84 Jmol AstexViewer SPICE
3R5X A 41 - 84 Jmol AstexViewer SPICE
B 41 - 84 Jmol AstexViewer SPICE
C 41 - 84 Jmol AstexViewer SPICE
D 41 - 84 Jmol AstexViewer SPICE