Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q858B1_BPK1F (Q858B1)

Summary

This is the summary of UniProt entry Q858B1_BPK1F (Q858B1).

Description: Precursor of gp17 EC=3.2.1.129 EC=3.2.1.129
Source organism: Enterobacteria phage K1F (Bacteriophage K1F) (NCBI taxonomy ID 344021)
Length: 1064 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Phage_T7_tail 1 166
disorder n/a 114 115
disorder n/a 123 136
low_complexity n/a 135 146
disorder n/a 183 196
Pfam A End_N_terminal 246 312
disorder n/a 246 247
disorder n/a 257 259
disorder n/a 262 266
disorder n/a 273 274
Pfam A End_beta_propel 313 755
Pfam A End_beta_barrel 424 506
disorder n/a 488 489
disorder n/a 493 498
disorder n/a 567 568
disorder n/a 570 573
disorder n/a 654 657
low_complexity n/a 695 709
Pfam A End_tail_spike 756 910
disorder n/a 839 842
disorder n/a 852 855
Pfam A Peptidase_S74 911 967
disorder n/a 1003 1020
low_complexity n/a 1012 1024
coiled_coil n/a 1044 1064

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q858B1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSTITQFPSG NTQYRIEFDY LARTFVVVTL VNSSNPTLNR VLEVGRDYRF
50
51
LNPTMIEMLV DQSGFDIVRI HRQTGTDLVV DFRNGSVLTA SDLTTAELQA
100
101
IHIAEEGRDQ TVDLAKEYAD AAGSSAGNAK DSEDEARRIA ESIRAAGLIG
150
151
YMTRRSFEKG YNVTTWSEVL LWEEDGDYYR WDGTLPKNVP AGSTPETSGG
200
201
IGLGAWVSVG DAALRSQISN PEGAILYPEL HRARWLDEKD ARGWGAKGDG
250
251
VTDDTAALTS ALNDTPVGQK INGNGKTYKV TSLPDISRFI NTRFVYERIP
300
301
GQPLYYASEE FVQGELFKIT DTPYYNAWPQ DKAFVYENVI YAPYMGSDRH
350
351
GVSRLHVSWV KSGDDGQTWS TPEWLTDLHP DYPTVNYHCM SMGVCRNRLF
400
401
AMIETRTLAK NALTNCALWD RPMSRSLHLT GGITKAANQR YATIHVPDHG
450
451
LFVGDFVNFS NSAVTGVSGD MTVATVIDKD NFTVLTPNQQ TSDLNNAGKN
500
501
WHMGTSFHKS PWRKTDLGLI PSVTEVHSFA TIDNNGFAMG YHQGDVAPRE
550
551
VGLFYFPDAF NSPSNYVRRQ IPSEYEPDAS EPCIKYYDGV LYLITRGTRG
600
601
DRLGSSLHRS RDIGQTWESL RFPHNVHHTT LPFAKVGDDL IMFGSERAEN
650
651
EWEAGAPDDR YKASYPRTFY ARLNVNNWNA DDIEWVNITD QIYQGGIVNS
700
701
GVGVGSVVVK DNYIYYMFGG EDHFNPWTYG DNSAKDPFKS DGHPSDLYCY
750
751
KMKIGPDNRV SRDFRYGAVP NRAVPVFFDT NGVRTVPAPM EFTGDLGLGH
800
801
VTIRASTSSN IRSEVLMEGE YGFIGKSIPT DNPAGQRIIF CGGEGTSSTT
850
851
GAQITLYGAN NTDSRRIVYN GDEHLFQSAD VKPYNDNVTA LGGPSNRFTT
900
901
AYLGSNPIVT SNGERKTEPV VFDDAFLDAW GDVHYIMYQW LDAVQLKGND
950
951
ARIHFGVIAQ QIRDVFIAHG LMDENSTNCR YAVLCYDKYP RMTDTVFSHN
1000
1001
EIVEHTDEEG NVTTTEEPVY TEVVIHEEGE EWGVRPDGIF FAEAAYQRRK
1050
1051
LERIEARLSA LEQK                                       
1064
 

Show the unformatted sequence.

Checksums:
CRC64:82FAB75EDC68DAB6
MD5:a4842ea1edd886082844fc2e266bed69

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
End_beta_barrel 424 - 506 1V0E A 424 - 506 Jmol AstexViewer SPICE
B 424 - 506 Jmol AstexViewer SPICE
C 424 - 506 Jmol AstexViewer SPICE
D 424 - 506 Jmol AstexViewer SPICE
E 424 - 506 Jmol AstexViewer SPICE
F 424 - 506 Jmol AstexViewer SPICE
1V0F A 424 - 506 Jmol AstexViewer SPICE
B 424 - 506 Jmol AstexViewer SPICE
C 424 - 506 Jmol AstexViewer SPICE
D 424 - 506 Jmol AstexViewer SPICE
E 424 - 506 Jmol AstexViewer SPICE
F 424 - 506 Jmol AstexViewer SPICE
End_beta_propel 313 - 755 1V0E A 313 - 755 Jmol AstexViewer SPICE
B 313 - 755 Jmol AstexViewer SPICE
C 313 - 755 Jmol AstexViewer SPICE
D 313 - 755 Jmol AstexViewer SPICE
E 313 - 755 Jmol AstexViewer SPICE
F 313 - 755 Jmol AstexViewer SPICE
1V0F A 313 - 755 Jmol AstexViewer SPICE
B 313 - 755 Jmol AstexViewer SPICE
C 313 - 755 Jmol AstexViewer SPICE
D 313 - 755 Jmol AstexViewer SPICE
E 313 - 755 Jmol AstexViewer SPICE
F 313 - 755 Jmol AstexViewer SPICE
End_N_terminal 246 - 312 1V0E A 246 - 312 Jmol AstexViewer SPICE
B 246 - 312 Jmol AstexViewer SPICE
C 246 - 312 Jmol AstexViewer SPICE
D 246 - 312 Jmol AstexViewer SPICE
E 246 - 312 Jmol AstexViewer SPICE
F 246 - 312 Jmol AstexViewer SPICE
1V0F A 246 - 312 Jmol AstexViewer SPICE
B 246 - 312 Jmol AstexViewer SPICE
C 246 - 312 Jmol AstexViewer SPICE
D 246 - 312 Jmol AstexViewer SPICE
E 246 - 312 Jmol AstexViewer SPICE
F 246 - 312 Jmol AstexViewer SPICE
End_tail_spike 756 - 910 1V0E A 756 - 910 Jmol AstexViewer SPICE
B 756 - 910 Jmol AstexViewer SPICE
C 756 - 910 Jmol AstexViewer SPICE
D 756 - 910 Jmol AstexViewer SPICE
E 756 - 910 Jmol AstexViewer SPICE
F 756 - 910 Jmol AstexViewer SPICE
1V0F A 756 - 910 Jmol AstexViewer SPICE
B 756 - 910 Jmol AstexViewer SPICE
C 756 - 910 Jmol AstexViewer SPICE
D 756 - 910 Jmol AstexViewer SPICE
E 756 - 910 Jmol AstexViewer SPICE
F 756 - 910 Jmol AstexViewer SPICE