Summary

This is the summary of UniProt entry Q895G7_CLOTE (Q895G7).

Description:

Methyl-accepting chemotaxis protein

Source organism:

Clostridium tetani (strain Massachusetts / E88) (NCBI taxonomy ID 212717)
View Pfam proteome data.

Length:

669 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source	Domain	Start	End	Gathering threshold (bits)		Score (bits)		E-value
Source	Domain	Start	End	Sequence	Domain	Sequence	Domain	Sequence	Domain
transmembrane	n/a	12	31	n/a	n/a	n/a	n/a	n/a	n/a
Pfam A	Cache_1	144	223	21.10	21.10	41.30	39.40	1.3e-07	5e-07
low_complexity	n/a	281	290	n/a	n/a	n/a	n/a	n/a	n/a
transmembrane	n/a	291	311	n/a	n/a	n/a	n/a	n/a	n/a
Pfam A	HAMP	292	361	24.20	24.20	52.90	51.00	4.5e-11	1.8e-10
low_complexity	n/a	297	307	n/a	n/a	n/a	n/a	n/a	n/a
Pfam A	MCPsignal	438	669	30.00	30.00	126.70	114.10	1.4e-33	9.3e-30
coiled_coil	n/a	604	624	n/a	n/a	n/a	n/a	n/a	n/a

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

We generate the topmost image from data in the Pfam database, but subsequent images are constructed on-the-fly using data retrieved from other sources using the Distributed Annotation System (DAS). DAS is a system for sharing sequence annotations in a standard format and we use it to find features and sequence information from a wide variety of other sources, from UniProt to InterPro to Superfamily.

Each DAS source is represented in a new track, although some sources may generate more than one track, if they have features which overlap. Each feature that we find is shown as a simple box, positioned according to its residue position on the sequence.

Moving your mouse over a feature in the display will highlight the feature and show a tooltip giving details of the feature. If the DAS source supplied a URL, you can also click on the feature to visit that URL. In some browsers you will also see a thin, vertical cursor, which follows the mouse and shows the residue position within the sequence.

You can turn DAS sources on and off using the control panel under the sequence images. Check the boxes for the DAS sources that you want to see; uncheck those that you are not interested in. Press Update to query the new set of DAS sources and re-generate the image. Note that if you have lots of sources turned on, the time taken to generate the images will increase. You can see the homepage for each of the DAS sources by clicking on its name in the update panel. The "source" link next to each source points directly at the DAS source. Depending on how the source is configured, that link may return some usage information or simply an XML fragment with the response to the empty query that you just made.

Please note: this is an experimental feature and there are several known bugs and limitations. Please be patient as we improve the tool.

Note: it can take a few seconds for this image to be generated and loaded.

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q895G7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:

MVSMKGLKAK MIYFVTFISI LCMAVLLSIS YKISYASLHE EFKGKSIETT

KKYSEEFDKW LGIESTNLME ISKNINHFKI YDYDKLQQYL AFQLKEKKST

100

101

SSDIYALFPN NRMVSGADWI PDKSLNFRER PWYKEAIKTK QVFFSNPYFD

150

151

PAFKKIVGTI SYPIMDNGNL ICVLAADIHF DSITNEVQKA KVSEESYGFL

200

201

LDGQNNIIVH LNKDYNPDGK TTKNLSQIAE GKLKTLSDNI KNNGEGFEKY

250

251

VDYDDESKFF TFNKLSTVDW TFAIAEPAHV LKDKLKDLLK GFLIALIISI

300

301

VISISSVYCL VSKLLKPVRE LTDYTKYVSE GNLDKNIIIK AKDEMGELGS

350

351

KFNDMLNSLK NIVSNINTVY SDVINSSHDL NSKASSLGDI SKEISQAMEQ

400

401

ISFDAVSLSE NMSKQHKSVL DFNEKIDMMS LGMDMLKKSS NDKGAIIQAN

450

451

IQNLNQLGNV NKKMDLHFQT IYNVIESFNE SVTAINGMTS EIVGISEQTN

500

501

LLALNASIEA ARAGEYGKGF AVVANEVKNL ASQSAKTADM ISSSIEKLLK

550

551

EATKFDAIKR ESLQIESFRK EISGEVLNSF SLIQENLKDD MYKIGELLIQ

600

601

IKDIDSSKEN IKTIIENVNE ISQQSASATE EITASIQSHT IIIDEMIEDI

650

651

SYLDNKVEEL SDSVKRFKL

669

Show the unformatted sequence.

Checksums:

CRC64:44FAB125E277FACF

MD5:ceff07207b5d327c86d78b2bc7e26027

Protein: Q895G7_CLOTE (Q895G7)

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Summary

Pfam domains

Sequence annotations

Sequence information