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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q8H5N0_ORYSJ (Q8H5N0)

Summary

This is the summary of UniProt entry Q8H5N0_ORYSJ (Q8H5N0).

Description: cDNA clone:J033073H17, full insert sequence
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 105 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L44 19 95
disorder n/a 28 58
low_complexity n/a 60 67
disorder n/a 91 92

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q8H5N0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVNVPKTKKT YCKNKECRKH TLHKVTQYKK GKDSLSAQGK RRYDRKQSGY
50
51
GGQTKPVFHK KAKTTKKIVL KLQCQSCKHY SQHPIKRCKH FEIGGDKKGK
100
101
GTSLF                                                 
105
 

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Checksums:
CRC64:6587208AC741A901
MD5:6e7a3398acd2b1efa99401ecd9888b8e

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L44 19 - 95 3IZR r 19 - 95 Jmol AstexViewer SPICE