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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q8JU67_9REOV (Q8JU67)

Summary

This is the summary of UniProt entry Q8JU67_9REOV (Q8JU67).

Description: Putative outer capsid VP4
Source organism: Grass carp reovirus (NCBI taxonomy ID 128987)
Length: 648 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Reovirus_M2 2 648
disorder n/a 27 28
disorder n/a 222 230
low_complexity n/a 246 260
low_complexity n/a 382 400
low_complexity n/a 446 458
disorder n/a 550 552

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q8JU67. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGNVQTSVNT YNITGDGNSF TPTSDMTSTA APAIDLKPGV LNPTGKLWRP
50
51
VGTSVATIDS LAIVSDRFGQ YSFVNEGMRE TFSKALFDIN MWQPLFQATK
100
101
TGCGPIVLSS FTTTTSGYVG ATAGDALDNP VTNGVFISTV QIMNLQRTIA
150
151
ARMRDVALWQ KHLDTAMTML TPDISAGSAS CNWKSLLAFA KDILPLDNLC
200
201
LTYPNEFYNV AIHRYPALKP GNPDTKLPDA QAHPLGEVAG AFNAATSEVG
250
251
SLVGSSSTLS QAISTMAGKD LDLIEADTPL PVSVFTPSLA PRSYRPAFIK
300
301
PEDAKWIAEF NNSSLIRKTL TYSGATYTVQ LGPGPTRVID MNAMIDSVLT
350
351
LDVSGTILPY DTNPDLSTSV PAFVLIQTSV PIQQVTTAAN ITAITVVSAA
400
401
GASAINLAIN VRGQPRFNML HLQATFERET ITGIPYIYGL GTFLIPSPTS
450
451
SSNFSNPTLM DGLLTVTPVL LRETTYKGEV VDAIVPATVM ANQTSEEVAS
500
501
ALANDAIVLV SNHLNKLANV VGDAIPVASR TDDSATSAIV SRLAVQHKLS
550
551
QVGQASPTPP DYPLLWRRAK RAASMFVSNP SLALQVGIPV LTQSGMLSAL
600
601
TSGVGTALRT GSLGKGVTDA SEKLRARQSL TVAKQAFFDQ IGSLWPGK  
648
 

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Checksums:
CRC64:B0EE242233903F4B
MD5:a37a2779b4067e36ab7082ddf4aedaab

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Reovirus_M2 10 - 648 3K1Q I 10 - 648 Jmol AstexViewer SPICE
J 10 - 648 Jmol AstexViewer SPICE
K 10 - 648 Jmol AstexViewer SPICE
O 10 - 648 Jmol AstexViewer SPICE
P 10 - 648 Jmol AstexViewer SPICE
Q 10 - 648 Jmol AstexViewer SPICE
U 10 - 648 Jmol AstexViewer SPICE
V 10 - 648 Jmol AstexViewer SPICE
W 10 - 648 Jmol AstexViewer SPICE
X 10 - 648 Jmol AstexViewer SPICE
2 - 42 3IYL A 2 - 42 Jmol AstexViewer SPICE
C 2 - 42 Jmol AstexViewer SPICE
E 2 - 42 Jmol AstexViewer SPICE
G 2 - 42 Jmol AstexViewer SPICE
I 2 - 42 Jmol AstexViewer SPICE
K 2 - 42 Jmol AstexViewer SPICE
M 2 - 42 Jmol AstexViewer SPICE
O 2 - 42 Jmol AstexViewer SPICE
Q 2 - 42 Jmol AstexViewer SPICE
S 2 - 42 Jmol AstexViewer SPICE
43 - 646 3IYL B 43 - 646 Jmol AstexViewer SPICE
D 43 - 646 Jmol AstexViewer SPICE
F 43 - 646 Jmol AstexViewer SPICE
H 43 - 646 Jmol AstexViewer SPICE
J 43 - 646 Jmol AstexViewer SPICE
L 43 - 646 Jmol AstexViewer SPICE
N 43 - 646 Jmol AstexViewer SPICE
P 43 - 646 Jmol AstexViewer SPICE
R 43 - 646 Jmol AstexViewer SPICE
T 43 - 646 Jmol AstexViewer SPICE