Summary
This is the summary of UniProt entry RL52_ORYSJ (Q8L4L4).
| Description: | 60S ribosomal protein L5-2 |
| Source organism: |
Oryza sativa subsp. japonica (Rice)
(NCBI taxonomy ID
39947)
View Pfam proteome data. |
| Length: | 304 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| low_complexity | n/a | 17 | 31 |
| Pfam A | Ribosomal_L18p | 30 | 173 |
| disorder | n/a | 35 | 36 |
| disorder | n/a | 40 | 41 |
| disorder | n/a | 127 | 128 |
| low_complexity | n/a | 161 | 172 |
| Pfam A | Ribosomal_L18_c | 192 | 284 |
| disorder | n/a | 250 | 262 |
| disorder | n/a | 264 | 270 |
| disorder | n/a | 285 | 304 |
| low_complexity | n/a | 295 | 304 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q8L4L4. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MSLQGGFVKT QKTHAYFKRF QVKFKRRRQG KTDYRARIRL TNQDKNKYNT
50 51
PKYRFVTNKD ITAQIVYATI AGDIVMAAAY SHELPRYGLE VGLTNYAAAY
100 101
CTGLLLARRV LTLRGLDQEY EGNVEATGED YYVEPADERR PFRALLDVGL
150 151
IRTTTGNRVF GALKGALDGG LDIPHSDKRF AGFKKDEKQL DSDIHRKYIY
200 201
GGHVADYMRS MAEEEPEKFQ AHFSEYLKKG IDADGMESLY KKVHAAIRAD
250 251
PTMAKSTKKE PATHKRYNLK KLTYEQRKAS LVERLNALNS SAGADDDDEE
300 301
EDDE
304
Show the unformatted sequence. |
| Checksums: |
CRC64:6C0307C860FB6905
MD5:48a91b4b5683bfca9d789ef08c7cb13c
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| Ribosomal_L18_c | 192 - 284 | 3IZR | Q | 192 - 284 | Jmol AstexViewer SPICE |
| Ribosomal_L18p | 30 - 173 | 3IZR | Q | 30 - 173 | Jmol AstexViewer SPICE |