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16  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RPOZ_THET8 (Q8RQE7)

Summary

This is the summary of UniProt entry RPOZ_THET8 (Q8RQE7).

Description: DNA-directed RNA polymerase subunit omega EC=2.7.7.6
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (NCBI taxonomy ID 300852)
View Pfam proteome data.
Length: 99 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RNA_pol_Rpb6 7 57
disorder n/a 35 36
disorder n/a 38 39
disorder n/a 41 43
disorder n/a 46 52
disorder n/a 90 92
disorder n/a 96 97

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q8RQE7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAEPGIDKLF GMVDSKYRLT VVVAKRAQQL LRHGFKNTVL EPEERPKMQT
50
51
LEGLFDDPNA VTWAMKELLT GRLVFGENLV PEDRLQKEME RLYPVEREE 
99
 

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Checksums:
CRC64:1D213933B0B98965
MD5:97ede64cb5c01afdb4371b0b3b6cf502

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RNA_pol_Rpb6 7 - 57 1IW7 E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
1SMY E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
1ZYR E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2A68 E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2A69 E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2A6E E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2A6H E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2BE5 E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2CW0 E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2O5I E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2O5J E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
2PPB E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
3AOH E 7 - 57 Jmol AstexViewer SPICE
J 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
3AOI E 7 - 57 Jmol AstexViewer SPICE
J 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
3DXJ E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE
3EQL E 7 - 57 Jmol AstexViewer SPICE
O 7 - 57 Jmol AstexViewer SPICE