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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RPOK_SULSO (Q97ZJ9)

Summary

This is the summary of UniProt entry RPOK_SULSO (Q97ZJ9).

Description: DNA-directed RNA polymerase subunit K EC=2.7.7.6
Source organism: Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (NCBI taxonomy ID 273057)
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Length: 95 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RNA_pol_Rpb6 20 78

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q97ZJ9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGLERDEILS QDLHFNEVFI SLWQNRLTRY EIARVISARA LQLAMGAPAL
50
51
IDINNLSSTD VISIAEEEFR RGVLPITIRR RLPNGKIILL SLRKS     
95
 

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Checksums:
CRC64:2EA09FA9B1EAF55A
MD5:2496ded0b8475f7654c942e070e769cd

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RNA_pol_Rpb6 20 - 78 2PMZ K 20 - 78 Jmol AstexViewer SPICE
W 20 - 78 Jmol AstexViewer SPICE
3HKZ K 20 - 78 Jmol AstexViewer SPICE
U 20 - 78 Jmol AstexViewer SPICE