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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q980R1_SULSO (Q980R1)

Summary

This is the summary of UniProt entry Q980R1_SULSO (Q980R1).

Description: DNA-directed RNA polymerase EC=2.7.7.6
Source organism: Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (NCBI taxonomy ID 273057)
View Pfam proteome data.
Length: 649 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RNA_pol_Rpb2_4 45 109
Pfam A RNA_pol_Rpb2_5 129 169
disorder n/a 151 155
Pfam A RNA_pol_Rpb2_6 174 547
disorder n/a 188 193
disorder n/a 356 357
disorder n/a 359 360
disorder n/a 537 539
Pfam A RNA_pol_Rpb2_7 549 641

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q980R1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLYGINERIV EKTLYEMGVV PVEEVIRRVT EGGEDQNEYL KWSKVILNGR
50
51
LIGYYQDGGE LANKIRERRR KGEISDEVNV GHIVTDFINE VHVNCDSGRV
100
101
RRPLIIVSNG NPLVTIEDIE KLESGAITFD DLVRQGKIEY LDAEEEENAY
150
151
VALEPNDLTP DHTHLEIWSP AILGITASII PYPEHNQSPR NTYQSAMAKQ
200
201
ALGLYAANYQ LRTDTRAHLL HYPQRPLVQT RALDIIGYTN RPAGNNAILA
250
251
VMSFTGYNME DSIIMNRSSV ERGMYRSTFF RLYSTEEVKY PGGQEDKIVM
300
301
PEAGVRGYKG KEYYRLLEDN GVVSPEVEVK GGDVLIGKVS PPRFLQEFKE
350
351
LSPEQAKRDT SIVTRHGEMG IVDLVLITET AEGNKLVKVR VRDLRIPTIG
400
401
DKFASRHGQK GVIGMLIPQV DMPYTVKGVV PDIILNPHAL PSRMTLGQIM
450
451
EGIAGKYAAL SGNIVDATPF YKTPIEQLQN EILRYGYLPD ATEVVYDGRT
500
501
GQKIKSRIYF GVVYYQKLHH MVADKLHARA RGPVQILTRQ PTEGRAREGG
550
551
LRFGEMERDC LIGFGTAMLL KDRLLDNSDR TMIYVCDQCG YIGWYDKNKN
600
601
KYVCPIHGDK SNLFPVTVSY AFKLLIQELM SMIISPRLVL EDKVGLSGG 
649
 

Show the unformatted sequence.

Checksums:
CRC64:5221C683EA213126
MD5:8566580e2f395fdb77c5d6e34cbf457a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RNA_pol_Rpb2_4 45 - 109 2PMZ B 520 - 584 Jmol AstexViewer SPICE
R 520 - 584 Jmol AstexViewer SPICE
3HKZ B 520 - 584 Jmol AstexViewer SPICE
J 520 - 584 Jmol AstexViewer SPICE
RNA_pol_Rpb2_5 129 - 169 2PMZ B 604 - 644 Jmol AstexViewer SPICE
R 604 - 644 Jmol AstexViewer SPICE
3HKZ B 604 - 644 Jmol AstexViewer SPICE
J 604 - 644 Jmol AstexViewer SPICE
RNA_pol_Rpb2_6 174 - 547 2PMZ B 649 - 1022 Jmol AstexViewer SPICE
R 649 - 1022 Jmol AstexViewer SPICE
3HKZ B 649 - 1022 Jmol AstexViewer SPICE
J 649 - 1022 Jmol AstexViewer SPICE
RNA_pol_Rpb2_7 549 - 641 2PMZ B 1024 - 1116 Jmol AstexViewer SPICE
R 1024 - 1116 Jmol AstexViewer SPICE
3HKZ B 1024 - 1116 Jmol AstexViewer SPICE
J 1024 - 1116 Jmol AstexViewer SPICE