Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RPON_SULSO (Q980Z8)

Summary

This is the summary of UniProt entry RPON_SULSO (Q980Z8).

Description: DNA-directed RNA polymerase subunit N EC=2.7.7.6
Source organism: Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (NCBI taxonomy ID 273057)
View Pfam proteome data.
Length: 66 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RNA_pol_N 1 60

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q980Z8. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLIPIRCFTC GSLIADKWQS FITRVNAGEN PGKVLDDLGV KRYCCRRMLL
50
51
SHVDIINEVI HYTRPI                                     
66
 

Show the unformatted sequence.

Checksums:
CRC64:C6774B541A1CFA13
MD5:be6c5adcfe24b0ea8ac6c568fd275a0f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RNA_pol_N 1 - 60 2PMZ N 1 - 60 Jmol AstexViewer SPICE
Y 1 - 60 Jmol AstexViewer SPICE
3HKZ N 1 - 60 Jmol AstexViewer SPICE
W 1 - 60 Jmol AstexViewer SPICE