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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q9E3W0_9REOV (Q9E3W0)

Summary

This is the summary of UniProt entry Q9E3W0_9REOV (Q9E3W0).

Description: VP1
Source organism: Grass carp reovirus (NCBI taxonomy ID 128987)
Length: 1299 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Reovirus_L2 1 1299
low_complexity n/a 15 34
disorder n/a 192 193
low_complexity n/a 466 485
low_complexity n/a 789 798
low_complexity n/a 893 913
low_complexity n/a 972 986
disorder n/a 1036 1039
disorder n/a 1122 1124
disorder n/a 1128 1132
disorder n/a 1137 1140
low_complexity n/a 1263 1276

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9E3W0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAAVFGIQLV PKLNTSTTRR TFLPLRFDLL LDRLQSTNLH GVLYRALDFN
50
51
PVDRSATVIQ TYPPLNAWSP HHAFIENPLD YRDWTEFIHD RALAFVGVLT
100
101
QRYPLTQNAQ RYTNPLVLGA AFGDFLNARS IDIFLDRLFY DPTQDSPITA
150
151
ITKFPYQWTI DSNVTTDSVR TSAGCKYITL YGYDPSRPST PATYGKHRPT
200
201
YATVFYYSTL PARSRLLANL AAGPTVLEHF DSPTYGPHLL LPQTGDVLGY
250
251
SSSLISQAAL LMVESVMDAL RDNANASAST AVTRLDQSYH PVTSFDPSTF
300
301
NTLLQRATNL ALLAVQGVQS ESAIPAIPTM SDVRSFVARL MAEGDPQQWF
350
351
PYRVDQILYW PESPFVPPIG PFYAPFRPVN FPFTTGSYTV VPDASRPLRL
400
401
LPQYRNATIT VQQADDAYED TALSPLITTH GFCVTGGVFT SIYDISGDPT
450
451
AYPPAQLVDA PNDYFDRERM ARRDLFRRLR APADRSAIKD RAVFDFLASL
500
501
VNPTTANPVL DTSFSMAYLG ASSAHANADE PVILADIRSG SIPGLPIPRR
550
551
IVQFGYDVVH GSLLDLSRAV PTGTFGLVYA DLDQVEDAGT DMPAANRAAI
600
601
AMLGTALQMT TAGGVSVLKV NFPTRAFWTQ VFNLYATHAT TLHLVKPTIV
650
651
NSSEVFLVFG GRQSNGALRS TTALQRALLS LYARNAAIDR AVTHIPFFGV
700
701
PDDGTSDLGI DAVRLFDPMF SDAVANLPSN ALASLVSRVV PSSIMFTRVP
750
751
SNGPVSTTIY GKRTFLSNRR RARLRDVPML ITTTLVHQRR FTTPPTFTLF
800
801
SSEAVPVTTL VAAGYNSFIS EQTRNPNLAH LLDLGTGPEC RILSLIPPTL
850
851
QVTMSDSRPC AELMASFDPA LTAYVQGDYS TAAFWNGIRC DSATAIFTIG
900
901
AAAAAAGTDL IAFVQQLIPR IVAAGGTRMW LQLNTPLYEV SSLPDLIEID
950
951
LRDHVYRFNG GERVEPYADP VPLQQAIAAL LPAAALSWHT LSPTCDWLPY
1000
1001
IIGVGSPLNL SDINTAISYS RLTPILHIDT TTPPLRVNPV PTPLNQQCAI
1050
1051
RITSLDPAAV LSVQHNGVEV IGGTPGNVIS VAGAAALQYI LANQEFLLQF
1100
1101
TPTLPGIFDV FLTTLGQPPV PRGSFTITPP PTTVALNMPP PRQLDFTDVG
1150
1151
NDARITCDPY YQLAVCIFKD GQYVRVNPEK ASVVTNAPNR DLHFVLDLAD
1200
1201
NHVLLYLCDV TPSGLGDRIA FPIVDIYRIA FPRNTPVRAS LPYTGGGAHL
1250
1251
TSGGNPFMSL TTPPAVLPAG VALAALSTSV ATQYPTYTLP AGVYEYVIE 
1299
 

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Checksums:
CRC64:60D7B779F12F7D1E
MD5:98ccd85f5d478779f79538e2a50e9748

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Reovirus_L2 1 - 1299 3K1Q A 1 - 1299 Jmol AstexViewer SPICE
2 - 1298 3IYL W 2 - 1298 Jmol AstexViewer SPICE