Summary
This is the summary of UniProt entry Q9E3W0_9REOV (Q9E3W0).
| Description: | VP1 |
| Source organism: |
Grass carp reovirus
(NCBI taxonomy ID
128987)
|
| Length: | 1299 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| Pfam A | Reovirus_L2 | 1 | 1299 |
| low_complexity | n/a | 15 | 34 |
| disorder | n/a | 192 | 193 |
| low_complexity | n/a | 466 | 485 |
| low_complexity | n/a | 789 | 798 |
| low_complexity | n/a | 893 | 913 |
| low_complexity | n/a | 972 | 986 |
| disorder | n/a | 1036 | 1039 |
| disorder | n/a | 1122 | 1124 |
| disorder | n/a | 1128 | 1132 |
| disorder | n/a | 1137 | 1140 |
| low_complexity | n/a | 1263 | 1276 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q9E3W0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MAAVFGIQLV PKLNTSTTRR TFLPLRFDLL LDRLQSTNLH GVLYRALDFN
50 51
PVDRSATVIQ TYPPLNAWSP HHAFIENPLD YRDWTEFIHD RALAFVGVLT
100 101
QRYPLTQNAQ RYTNPLVLGA AFGDFLNARS IDIFLDRLFY DPTQDSPITA
150 151
ITKFPYQWTI DSNVTTDSVR TSAGCKYITL YGYDPSRPST PATYGKHRPT
200 201
YATVFYYSTL PARSRLLANL AAGPTVLEHF DSPTYGPHLL LPQTGDVLGY
250 251
SSSLISQAAL LMVESVMDAL RDNANASAST AVTRLDQSYH PVTSFDPSTF
300 301
NTLLQRATNL ALLAVQGVQS ESAIPAIPTM SDVRSFVARL MAEGDPQQWF
350 351
PYRVDQILYW PESPFVPPIG PFYAPFRPVN FPFTTGSYTV VPDASRPLRL
400 401
LPQYRNATIT VQQADDAYED TALSPLITTH GFCVTGGVFT SIYDISGDPT
450 451
AYPPAQLVDA PNDYFDRERM ARRDLFRRLR APADRSAIKD RAVFDFLASL
500 501
VNPTTANPVL DTSFSMAYLG ASSAHANADE PVILADIRSG SIPGLPIPRR
550 551
IVQFGYDVVH GSLLDLSRAV PTGTFGLVYA DLDQVEDAGT DMPAANRAAI
600 601
AMLGTALQMT TAGGVSVLKV NFPTRAFWTQ VFNLYATHAT TLHLVKPTIV
650 651
NSSEVFLVFG GRQSNGALRS TTALQRALLS LYARNAAIDR AVTHIPFFGV
700 701
PDDGTSDLGI DAVRLFDPMF SDAVANLPSN ALASLVSRVV PSSIMFTRVP
750 751
SNGPVSTTIY GKRTFLSNRR RARLRDVPML ITTTLVHQRR FTTPPTFTLF
800 801
SSEAVPVTTL VAAGYNSFIS EQTRNPNLAH LLDLGTGPEC RILSLIPPTL
850 851
QVTMSDSRPC AELMASFDPA LTAYVQGDYS TAAFWNGIRC DSATAIFTIG
900 901
AAAAAAGTDL IAFVQQLIPR IVAAGGTRMW LQLNTPLYEV SSLPDLIEID
950 951
LRDHVYRFNG GERVEPYADP VPLQQAIAAL LPAAALSWHT LSPTCDWLPY
1000 1001
IIGVGSPLNL SDINTAISYS RLTPILHIDT TTPPLRVNPV PTPLNQQCAI
1050 1051
RITSLDPAAV LSVQHNGVEV IGGTPGNVIS VAGAAALQYI LANQEFLLQF
1100 1101
TPTLPGIFDV FLTTLGQPPV PRGSFTITPP PTTVALNMPP PRQLDFTDVG
1150 1151
NDARITCDPY YQLAVCIFKD GQYVRVNPEK ASVVTNAPNR DLHFVLDLAD
1200 1201
NHVLLYLCDV TPSGLGDRIA FPIVDIYRIA FPRNTPVRAS LPYTGGGAHL
1250 1251
TSGGNPFMSL TTPPAVLPAG VALAALSTSV ATQYPTYTLP AGVYEYVIE
1299
Show the unformatted sequence. |
| Checksums: |
CRC64:60D7B779F12F7D1E
MD5:98ccd85f5d478779f79538e2a50e9748
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| Reovirus_L2 | 1 - 1299 | 3K1Q | A | 1 - 1299 | Jmol AstexViewer SPICE |
| 2 - 1298 | 3IYL | W | 2 - 1298 | Jmol AstexViewer SPICE |