Summary
This is the summary of UniProt entry PCLO_RAT (Q9JKS6).
| Description: | Protein piccolo |
| Source organism: |
Rattus norvegicus (Rat)
(NCBI taxonomy ID
10116)
View Pfam proteome data. |
| Length: | 5085 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| Pfam B | Pfam-B_36002 | 1 | 65 |
| disorder | n/a | 1 | 160 |
| low_complexity | n/a | 4 | 29 |
| disorder | n/a | 162 | 520 |
| low_complexity | n/a | 182 | 196 |
| low_complexity | n/a | 204 | 221 |
| low_complexity | n/a | 253 | 268 |
| low_complexity | n/a | 395 | 480 |
| low_complexity | n/a | 502 | 516 |
| Pfam A | zf-piccolo | 519 | 580 |
| disorder | n/a | 582 | 1018 |
| low_complexity | n/a | 589 | 613 |
| low_complexity | n/a | 635 | 657 |
| low_complexity | n/a | 672 | 696 |
| low_complexity | n/a | 834 | 852 |
| low_complexity | n/a | 938 | 956 |
| low_complexity | n/a | 974 | 991 |
| Pfam A | zf-piccolo | 1006 | 1066 |
| disorder | n/a | 1024 | 1026 |
| disorder | n/a | 1052 | 1055 |
| disorder | n/a | 1063 | 1064 |
| disorder | n/a | 1066 | 1611 |
| low_complexity | n/a | 1083 | 1096 |
| low_complexity | n/a | 1106 | 1120 |
| low_complexity | n/a | 1172 | 1192 |
| Pfam B | Pfam-B_83621 | 1220 | 1258 |
| low_complexity | n/a | 1283 | 1299 |
| low_complexity | n/a | 1332 | 1343 |
| low_complexity | n/a | 1344 | 1355 |
| low_complexity | n/a | 1409 | 1425 |
| low_complexity | n/a | 1456 | 1472 |
| low_complexity | n/a | 1509 | 1523 |
| low_complexity | n/a | 1544 | 1554 |
| disorder | n/a | 1614 | 1620 |
| disorder | n/a | 1622 | 1628 |
| disorder | n/a | 1630 | 1819 |
| low_complexity | n/a | 1680 | 1693 |
| low_complexity | n/a | 1718 | 1761 |
| coiled_coil | n/a | 1719 | 1753 |
| low_complexity | n/a | 1801 | 1812 |
| disorder | n/a | 1841 | 1866 |
| coiled_coil | n/a | 1851 | 1871 |
| disorder | n/a | 1869 | 1876 |
| disorder | n/a | 1880 | 1882 |
| disorder | n/a | 1915 | 1935 |
| disorder | n/a | 1941 | 1945 |
| disorder | n/a | 1993 | 1994 |
| disorder | n/a | 2008 | 2009 |
| disorder | n/a | 2016 | 2041 |
| low_complexity | n/a | 2058 | 2073 |
| disorder | n/a | 2090 | 2091 |
| disorder | n/a | 2114 | 2138 |
| low_complexity | n/a | 2121 | 2149 |
| disorder | n/a | 2149 | 2155 |
| disorder | n/a | 2164 | 2165 |
| disorder | n/a | 2168 | 2169 |
| disorder | n/a | 2193 | 2198 |
| disorder | n/a | 2202 | 2211 |
| disorder | n/a | 2219 | 2247 |
| disorder | n/a | 2258 | 2266 |
| disorder | n/a | 2269 | 2393 |
| low_complexity | n/a | 2333 | 2344 |
| low_complexity | n/a | 2351 | 2388 |
| low_complexity | n/a | 2390 | 2407 |
| disorder | n/a | 2395 | 2487 |
| low_complexity | n/a | 2432 | 2443 |
| low_complexity | n/a | 2452 | 2470 |
| disorder | n/a | 2496 | 2519 |
| disorder | n/a | 2532 | 2538 |
| disorder | n/a | 2540 | 2553 |
| disorder | n/a | 2575 | 2576 |
| disorder | n/a | 2580 | 2585 |
| low_complexity | n/a | 2621 | 2649 |
| disorder | n/a | 2630 | 2632 |
| disorder | n/a | 2646 | 2647 |
| disorder | n/a | 2650 | 2653 |
| disorder | n/a | 2655 | 2656 |
| disorder | n/a | 2658 | 2659 |
| disorder | n/a | 2695 | 2696 |
| disorder | n/a | 2699 | 2700 |
| disorder | n/a | 2706 | 2707 |
| low_complexity | n/a | 2743 | 2754 |
| disorder | n/a | 2755 | 2756 |
| disorder | n/a | 2761 | 2766 |
| disorder | n/a | 2771 | 2787 |
| disorder | n/a | 2791 | 2793 |
| low_complexity | n/a | 2808 | 2824 |
| disorder | n/a | 2822 | 2825 |
| disorder | n/a | 2827 | 2830 |
| disorder | n/a | 2834 | 2835 |
| disorder | n/a | 2838 | 2844 |
| disorder | n/a | 2847 | 2856 |
| Pfam B | Pfam-B_3372 | 2859 | 2906 |
| disorder | n/a | 2859 | 2872 |
| disorder | n/a | 2900 | 2902 |
| disorder | n/a | 2905 | 2917 |
| disorder | n/a | 2926 | 2927 |
| disorder | n/a | 2930 | 2939 |
| disorder | n/a | 2978 | 3002 |
| disorder | n/a | 3004 | 3025 |
| disorder | n/a | 3059 | 3062 |
| disorder | n/a | 3071 | 3078 |
| disorder | n/a | 3086 | 3089 |
| disorder | n/a | 3116 | 3127 |
| disorder | n/a | 3131 | 3132 |
| low_complexity | n/a | 3133 | 3144 |
| disorder | n/a | 3151 | 3153 |
| low_complexity | n/a | 3151 | 3174 |
| coiled_coil | n/a | 3154 | 3174 |
| disorder | n/a | 3159 | 3160 |
| low_complexity | n/a | 3181 | 3194 |
| disorder | n/a | 3224 | 3226 |
| coiled_coil | n/a | 3227 | 3258 |
| low_complexity | n/a | 3228 | 3259 |
| disorder | n/a | 3263 | 3283 |
| disorder | n/a | 3292 | 3295 |
| disorder | n/a | 3297 | 3298 |
| disorder | n/a | 3305 | 3307 |
| disorder | n/a | 3322 | 3323 |
| disorder | n/a | 3332 | 3334 |
| disorder | n/a | 3341 | 3344 |
| disorder | n/a | 3346 | 3486 |
| disorder | n/a | 3490 | 3493 |
| disorder | n/a | 3495 | 3500 |
| disorder | n/a | 3503 | 3577 |
| disorder | n/a | 3579 | 3707 |
| disorder | n/a | 3709 | 3747 |
| coiled_coil | n/a | 3709 | 3746 |
| Pfam B | Pfam-B_4130 | 3715 | 3782 |
| disorder | n/a | 3751 | 3868 |
| low_complexity | n/a | 3753 | 3768 |
| disorder | n/a | 3872 | 3903 |
| low_complexity | n/a | 3881 | 3901 |
| low_complexity | n/a | 3965 | 3977 |
| low_complexity | n/a | 4022 | 4033 |
| disorder | n/a | 4023 | 4028 |
| disorder | n/a | 4037 | 4038 |
| disorder | n/a | 4052 | 4057 |
| disorder | n/a | 4065 | 4066 |
| disorder | n/a | 4142 | 4150 |
| disorder | n/a | 4152 | 4166 |
| low_complexity | n/a | 4167 | 4178 |
| disorder | n/a | 4169 | 4170 |
| low_complexity | n/a | 4203 | 4214 |
| disorder | n/a | 4213 | 4250 |
| low_complexity | n/a | 4228 | 4243 |
| low_complexity | n/a | 4247 | 4263 |
| disorder | n/a | 4256 | 4258 |
| disorder | n/a | 4260 | 4262 |
| disorder | n/a | 4271 | 4359 |
| disorder | n/a | 4377 | 4379 |
| disorder | n/a | 4382 | 4426 |
| Pfam A | PDZ | 4448 | 4534 |
| disorder | n/a | 4456 | 4457 |
| disorder | n/a | 4460 | 4464 |
| disorder | n/a | 4480 | 4483 |
| disorder | n/a | 4489 | 4492 |
| disorder | n/a | 4494 | 4497 |
| disorder | n/a | 4515 | 4518 |
| disorder | n/a | 4532 | 4538 |
| disorder | n/a | 4541 | 4573 |
| disorder | n/a | 4575 | 4576 |
| disorder | n/a | 4584 | 4639 |
| low_complexity | n/a | 4592 | 4619 |
| Pfam A | C2 | 4654 | 4752 |
| disorder | n/a | 4692 | 4693 |
| disorder | n/a | 4764 | 4906 |
| low_complexity | n/a | 4781 | 4795 |
| low_complexity | n/a | 4818 | 4834 |
| coiled_coil | n/a | 4854 | 4874 |
| low_complexity | n/a | 4857 | 4867 |
| low_complexity | n/a | 4886 | 4909 |
| disorder | n/a | 4910 | 4947 |
| disorder | n/a | 4952 | 4953 |
| Pfam A | C2 | 4969 | 5059 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q9JKS6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MGNEASLEGE GLPEGLAAAA GAGGSGSALH PGIPAGMEAD LSQLSEEERR
50 51
QIAAVMSRAQ GLPKGSVPPA AAESPSMHRK QELDSSQAPQ QPGKPPDPGR
100 101
PTQPGLSKSR TTDTFRSEQK LPGRSPSTIS LKESKSRTDF KEEYKSSMMP
150 151
GFFSDVNPLS AVSSVVNKFN PFDLISDSEA SQEETTKKQK VVQKEQGKSE
200 201
GMAKPPLQQP SPKPIPKQQG QVKEVIQQDS SPKSVSSQQA EKVKPQAPGT
250 251
GKPSQQSPAQ TPAQQASPGK PVAQQPGSAK ATVQQPGPAK SPAQPAGTGK
300 301
SPAQPPAKTP GQQAGLEKTS SSQQPGPKSL AQTPGHGKFP LGPVKSPAQQ
350 351
PGTAKHPAQQ PGPQTAAKVP GPTKTPAQQS GPGKTPAQQP GPTKPSPQQP
400 401
IPAKPQPQQP VATKTQPQQS APAKPQPQQP APAKPQPQQP TPAKPQPQPP
450 451
TPAKPQPQPP TATKPQPQPP TATKPHHQQP GLAKPSAQQP TKSISQTVTG
500 501
RPLQPPPTSA AQTPAQGLSK TICPLCNTTE LLLHIPEKAN FNTCTECQST
550 551
VCSLCGFNPN PHLTEIKEWL CLNCQMQRAL GGDLAAAIPS SPQPTPKAAT
600 601
APTATASKSP VPSQQASPKK EPPSKQDSPK ALESKKPPEP KKPPEPKKPP
650 651
EPKKPPPLVK QPTLHGPTPA TAPQLPVAEA LPEPAPPKEP SGPLPEQAKA
700 701
PVGDVEPKQP KMTETRADIQ SSSTTKPDIL SSQVQSQAQV KTASPLKTDS
750 751
AKPSQSFPPT GEKTTPLDSK AMPRPASDSK IISQPGPGSE SKDPKHIDPI
800 801
QKKDEPKKAQ PKGSPKPETK PVPKGSPTPS GTRPTAGQAA PPSQQPPKPQ
850 851
EQSRRFSLNL GGITDAPKSQ PTTPQETVTG KLFGFGASIF SQASNLISTA
900 901
GQQGPHPQTG PAAPSKQAPT PSQSPAAQGP AKSTGQLPPA PAKATAVKKE
950 951
AKAAAAENLE SKPEQAPTAK KTEKDKKPPP AKVGKPPPSE PEKAVPAHKP
1000 1001
DKTTKPKPAC PLCRTELNLG SQEPPNFNTC TECKNQVCNL CGFNPTPHLT
1050 1051
EIQEWLCLNC QTQRAISGQL GDMGKMPPAP SGPKASPMPA PAEPSSQKTP
1100 1101
TGTQVKGKKK EAEGKTEAEK PVPEKETASI EKTPPMVTTD QKLEESEGKK
1150 1151
SKVSALPEKK PSEEEKAISA DKKERKPPAE EKPPLEEKKP IPVDKKLPPE
1200 1201
AKPLSSEGEE KHEILKAHVQ IPEEEPTGKV AAKAGEEEQQ PDSRPEALPG
1250 1251
ATPLTLPKAG EKERAVAQPQ AEGSSKDGQG ERSKEKTEKE EDKSDTSSSQ
1300 1301
QPKSPQGLSD TGYSSDGISG SLGEIPSLIP SDEKDLLKGL KKDSFSQESS
1350 1351
PSSPSDLAKL ESTVLSILEA QASTLVGEKA EKKTQPQKIS PEKPQDQQKT
1400 1401
QTASETLDIT ISEEEIKESQ EKKVSPKKDS EQGFPSRKEH KEKPELVDDL
1450 1451
SPRRASYDSV EDSSESENSP VVRRKRRTSI GSSSSDEYKQ EDSQGSGEEE
1500 1501
DFIRKQIIEM SADEDASGSE DEEFIRSQLK EISGVGESQK REEAKGKGKG
1550 1551
VAGKHRRLTR KSSTSFDDDA GRRHSWHDED DETFDESPEL KFRETKSQES
1600 1601
EELVVAGGGG LRRFKTIELN STIADKYSSE SSQKKTILYF DEEPELEMES
1650 1651
LTDSPEDRSR GEGSSSLHAS SFTPGTSPTS VSSLDEDSDS SPSHKKGESK
1700 1701
QQRKARHRSH GPLLPTIEDS SEEEELREEE ELLKEQEKQR ELEQQQRKSS
1750 1751
SKKSKKDKDE LRAQRRRERP KTPPSNLSPI EDASPTEELR QAAEMEELHR
1800 1801
SSCSEYSPSI ESDPEGFEIS PEKIIEVQKV YKLPAAVSLY SPTDEQSVMQ
1850 1851
KEGVQKALKS AEEMYEEMMQ KPHKYKAFPA ANERDEVFEK EPLYGGMLIE
1900 1901
DYIYESLVED TYNGSVDGSL LTRQEEQNGF MQQRGREQKV RLQEQIYDDP
1950 1951
MQKISDLQKE FYELESLHSV VPQEDIVSSS YIIPESHEIV DLGSMVMSTS
2000 2001
EEKKLLDADS AYEELMRRQQ VQVTDGSSPV QTTIGDDMAE STLDFDRVQD
2050 2051
ASLTSSILSG ASLTDSTSSA TLSIPDVKIT QQFSAEELED EYVTDYTREI
2100 2101
QDIIAHESLI LTYSEPSESA TSVPPSDTPS LTSSISSVCT TDSSSPVTTL
2150 2151
DSLTTVYTEP ADVMTKFKDS EEISSTYFPG SIIDYPEDIS VSLDRTIMPE
2200 2201
SRTNEDRIVL SFSGMAPSVV ESVGTKPERP QADTISTDLP ISEKDLIKGK
2250 2251
KETGDGIILE VLDAYKDKRE ESEAELTKIS LPEPGLAQAP SSVTAPQIKE
2300 2301
QHVSPHSVSG KISGQEKPTY RLPSGSLPVS THPSKSRPFF RSSSLDISAQ
2350 2351
PPPPPPPPPP SPSTSSPPPT PPLPPATSPK PPTYPKKKLA VAATVTSTTI
2400 2401
VTTHVDALTM VEAAAARRSN GLPATKMCAI APPPVPPKPS QIPTGLVFTH
2450 2451
RPEAIKPPIA PKPAVPQIPV TTQKPTDTCP KPTGLSLTST MSLNLVTSAD
2500 2501
YNVPSPTSPL SPHSNKSSPR YSKSLMDTYV VITLPSEPGT PTDSSAAQAI
2550 2551
TSWPLGSPPK DLVSLETVFS VVPPMTSTEI PSASQPTLYT SGALGTFSVT
2600 2601
PAVTASLFQT VPTSLTQFLP AEASKPEVSA VSSAVPSVAP RSVSIPIPPE
2650 2651
PLALDRHQYK ENGKLPLIGD AIDLRTIPKS EVKVTEKCMD LSASAMDVKR
2700 2701
QTTANEVYRR QISAVQPSII NLSAASSLGT PVTMDSKTVA VVTCTDTTIY
2750 2751
TTGTESQVGI EHAVTSPLQL TTSKHTELPY RKPSSQAFPT IRDEAPINLS
2800 2801
LGPSAQAVTL AVTKPVTVPP VGVTNGWTDS TLSQGVADGE VVDLSTSKSH
2850 2851
RTVVTMDEST SNVVTKIIED DEKPVDLTAG RRAVCCDMVY TLPFGRSCTA
2900 2901
QQPATTLPED RFGYRDDHYQ YDRSGPYGYR GIGGMKPSMS DTNLPEAGHF
2950 2951
FYKSKNAFDY SGGTGAAVDL TSGRVSTGEV MDYSSKTTGP YPETRQVISG
3000 3001
VGISTPQYST ARLTPPPGPQ YGVGSVLRSS NGVVYSSVAT PIPSTFAITT
3050 3051
QPGSIFSTTV RDLSGIPTTD AMTSLSALHQ SQPMPRSYFI TTGASETDIA
3100 3101
VTGIDINASL QTITMETLPA ETMDSVPTLT TASEVFSEVV GEESTLLIVP
3150 3151
DEDKQQQQLD LERELLELEK IKQQRFAEEL EWERQEIQRF REQEKIMVQK
3200 3201
KLEELQSMKQ HLLYQQEEER QAQFMMRQET LAQQQLQLEQ IQQLQQQLHQ
3250 3251
QLEEQKLRQI YQYNYDPSGT SSPQTTTEQA ILEGQYAATE GSQFWATEDA
3300 3301
TTTASTVVAI EIPQSQGWYT VQSDGVTQYI APPGILSTVS EIPLTDVVVK
3350 3351
EEKQPKKRSS GAKVRGQYDE MGESVADDPR NLKKIVDSGV QTDDEETADR
3400 3401
SYASRRRRTK KSVDTSVQTD DEDQDEWDMP SRSRRKARTG KYGDSTAEGD
3450 3451
KTKPLSKVSS VAVQTVAEIS VQTEPVGTIR TPSIRARVDA KVEIIKHISA
3500 3501
PEKTYKGGSL GCQTETDSDT QSPPYLGATS PPKDKKRPTP LEIGYSSSHL
3550 3551
RADPTVQLAP SPPKSPKVLY SPISPLSPGN ALEPAFVPYE KPLPDDISPQ
3600 3601
KVLHPDMAKV PPASPKTAKM MQRSMSDPKP LSPTADESSR APFQYSEGFT
3650 3651
TKGSQTMTAS GTQKKVKRTL PNPPPEEVST GTQSTYSTMG TASRRRMCRT
3700 3701
NTMARAKILQ DIDRELDLVE RESAKLRKKQ AELDEEEKEI DAKLRYLEMG
3750 3751
INRRKEALLK EREKRERAYL QGVAEDRDYM SDSEVSSTRP SRVESQHGVE
3800 3801
RPRTAPQTEF SQFIPPQTQT EAQLVPPTSP YTQYQYSSPA LPTQAPTPYT
3850 3851
QQSHFQQQTL YHQQVSPYQT QPTFQAVATM SFTPQAQPTP TPQPSYQLPS
3900 3901
QMMVIQQKPR QTTLYLEPKI TSNYEVIRNQ PLMIAPVSTD NTYAVSHLGS
3950 3951
KYNSLDLRIG LEERSSMAGS PISSISADSF YADIDHHTSR NYVLIDDIGD
4000 4001
ITKGTAALST VFSLHEKDLS KTDRLLRTTE TRRSQEVTDF LAPLQTSSRL
4050 4051
HSYVKADEDP MEDPYELKLL KHQIKQEFRR GTESLDHLAG LSHYYHADTS
4100 4101
YRHFPKSEKY SISRLTLEKQ AAKQLPAAIL YQKQSKHKKS LIDPKMSKFS
4150 4151
PIQESRDLEP DYPTYMSSGT SSIGGISSRA RLLQDDITFG LRKNITDQQK
4200 4201
FMGSSLGSGL GTLGNTIRSA LQDEADKPYS SGSRSRPSSR PSSVYGLDLS
4250 4251
IKRDSSSSSL RLKAQEAEAL DVSFGHSSSS ARTKPTSLPI SQSRGRIPIV
4300 4301
AQSSEEESPL SPVGQPMGMA RAAAGPLPPI SADTRDQFGS SHSLPEVQQH
4350 4351
MREESRTRGY DRDIAFIMDD FQHAMSDSEA YHLRREETDW FDKPRESRLE
4400 4401
NGHGLDRKLP ERLVHSRPLS QHQEQILQMN GKTIHYIFPH ARVKITRDFK
4450 4451
DHTGSGNGLG IRIVGGKEIP GHSGEIGAYI AKILPGESAE HTGPLMEGMQ
4500 4501
VLEWNGVPLT SKTYEEVQSI INQQSGEAEI CVRLDLNMLS DSENPQHLEL
4550 4551
HEPPKVDKAK SPGVDPKQLA AELQKVSLQQ SPLVMSSVVE KGSHAHSGPT
4600 4601
SAGSSSVPSP GQPGSPSVSK KKHSSTKPTD GPKAASHPIT GEIQLQINYD
4650 4651
LGNLIIHILQ ARNLVPRDNN GYSDPFVKVY LLPGRGQVMV VQNASAEYKR
4700 4701
RTKYVQKSLN PEWNQTVIYK SISMEQLMKK TLEVTVWDYD RFSSNDFLGE
4750 4751
VLIDLSSTSH LDNTPRWYPL KEQTESIDHG KSHSSQNSQQ SPKPSVIKSR
4800 4801
SHGIFPDPSK DMQVPTIEKS HSSPGSSKSS SEGHLRSHGP SRSQSKTSVA
4850 4851
QTHLEDAGVA IAAAEAAVQQ LRIQPTKPTN HRPAESSVST GSSGSSVGSG
4900 4901
YSVDSEGSSC VAGEPNLLPI PRIGKMGQNG QDPVKQPGMG ATDTEGKTQV
4950 4951
MGEIKLALKK EMKTDGEQLI VEILQCRNIT YKFKSPDHLP DLYVKLYVIN
5000 5001
ISTQKKVIKK KTRVCRHDRE PSFNETFRFS LSPAGHSLQI LLFSNGGKFM
5050 5051
KKTLIGEACI WLDKVDLRKR IVNWHKLLVS PTQTH
5085
Show the unformatted sequence. |
| Checksums: |
CRC64:5A1BB543201A7450
MD5:824cfb284bebc731f74de2b0304ff77c
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| C2 | 4654 - 4752 | 1RH8 | A | 4654 - 4752 | Jmol AstexViewer SPICE |