Summary
This is the summary of UniProt entry SYR_CAMJE (Q9PNC0).
| Description: | Arginine--tRNA ligase EC=6.1.1.19 |
| Source organism: |
Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
(NCBI taxonomy ID
192222)
View Pfam proteome data. |
| Length: | 530 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| Pfam A | Arg_tRNA_synt_N | 1 | 77 |
| Pfam A | tRNA-synt_1d | 85 | 399 |
| disorder | n/a | 93 | 94 |
| low_complexity | n/a | 194 | 208 |
| coiled_coil | n/a | 222 | 242 |
| coiled_coil | n/a | 246 | 266 |
| Pfam A | DALR_1 | 414 | 528 |
| transmembrane | n/a | 502 | 522 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q9PNC0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MKSIIFNEIK KILECDFALE NPKDKNLAHF ATPLAFSLAK ELKKSPMLIA
50 51
SDLASKFQNH DCFESVEAVN GYLNFRISKT FLNELANQAL TNPNDFTKGE
100 101
KKQESFLLEY VSANPTGPLH IGHARGAVFG DTLTRLARHL GYKFNTEYYV
150 151
NDAGNQIYLL GLSILLSVKE SILHENVEYP EQYYKGEYIV DLAKEAFEKF
200 201
GKEFFSEENI PSLADWAKDK MLVLIKQNLE QAKIKIDSYV SERSYYDALN
250 251
ATLESLKEHK GIYEQEGKIW LASSQKGDEK DRVIIREDGR GTYLAADIVY
300 301
HKDKMSRGYG KCINIWGADH HGYIPRMKAA MEFLGFDSNN LEIILAQMVS
350 351
LLKDGEPYKM SKRAGNFILM SDVVDEIGSD ALRYIFLSKK CDTHLEFDIS
400 401
DLQKEDSSNP VYYINYAHAR IHQVFAKAGK KIDDVMKADL QSLNQDGVNL
450 451
LFEALNLKAV LNDAFEARAL QKIPDYLKNL AANFHKFYNE NKVVGSANEN
500 501
DLLKLFSLVA LSIKTAFSLM GIEAKNKMEH
530
Show the unformatted sequence. |
| Checksums: |
CRC64:D2C9B35AF857B2B8
MD5:e9418b4cc7ece8aadf7002fc8261f365
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| DALR_1 | 414 - 528 | 3FNR | A | 414 - 528 | Jmol AstexViewer SPICE |
| tRNA-synt_1d | 85 - 399 | 3FNR | A | 85 - 399 | Jmol AstexViewer SPICE |