Summary
This is the summary of UniProt entry HN_NDVK (Q9Q2W5).
| Description: | Hemagglutinin-neuraminidase EC=3.2.1.18 |
| Source organism: |
Newcastle disease virus (strain Kansas) (NDV)
(NCBI taxonomy ID
332244)
|
| Length: | 577 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| transmembrane | n/a | 23 | 46 |
| Pfam A | HN | 24 | 569 |
| low_complexity | n/a | 27 | 45 |
| disorder | n/a | 262 | 263 |
| low_complexity | n/a | 508 | 530 |
| disorder | n/a | 576 | 577 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q9Q2W5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MDRAVSQVAL ENDEREAKNT WRLIFRIAIL LLTVVTLATS VASLVYSMGA
50 51
STPSDLVGIP TRISRAEEKI TSALGSNQDV VDRIYKQVAL ESPLALLNTE
100 101
TTIMNAITSL SYQINGAANN SGWGAPIHDP DFIGGIGKEL IVDNASDVTS
150 151
FYPSAFQEHL NFIPAPTTGS GCTRIPSFDM SATHYCYTHN VILSGCRDHS
200 201
HSHQYLALGV LRTTATGRIF FSTLRSISLD DTQNRKSCSV SATPLGCDML
250 251
CSKVTETEEE DYNSAVPTLM AHGRLGFDGQ YHEKDLDVTT LFEDWVANYP
300 301
GVGGGSFIDG RVWFSVYGGL KPNSPSDTVQ EGKYVIYKRY NDTCPDEQDY
350 351
QIRMAKSSYK PGRFGGKRIQ QAILSIKVST SLGEDPVLTV PPNTVTLMGA
400 401
EGRILTVGTS HFLYQRGSSY FSPALLYPMT VSNKTATLHS PYTFNAFTRP
450 451
GSIPCQASAR CPNSCVTGVY TDPYPLIFYR NHTLRGVFGT MLDSEQARLN
500 501
PASAVFDSTS RSRITRVSSS STKAAYTTST CFKVVKTNKT YCLSIAEISN
550 551
TLFGEFRIVP LLVEILKNDG VREARSG
577
Show the unformatted sequence. |
| Checksums: |
CRC64:6A1F03C8DD3F7753
MD5:6b3cd3e0ff4dc2fb875427130551f4d7
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| HN | 124 - 569 | 1E8T | A | 124 - 569 | Jmol AstexViewer SPICE |
| B | 124 - 569 | Jmol AstexViewer SPICE | |||
| 1E8U | A | 124 - 569 | Jmol AstexViewer SPICE | ||
| B | 124 - 569 | Jmol AstexViewer SPICE | |||
| 1E8V | A | 124 - 569 | Jmol AstexViewer SPICE | ||
| B | 124 - 569 | Jmol AstexViewer SPICE |