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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: TIG_DEIRA (Q9RT21)

Summary

This is the summary of UniProt entry TIG_DEIRA (Q9RT21).

Description: Trigger factor EC=5.2.1.8
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) (NCBI taxonomy ID 243230)
View Pfam proteome data.
Length: 465 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Trigger_N 2 144
disorder n/a 98 99
disorder n/a 134 138
disorder n/a 142 143
disorder n/a 145 156
disorder n/a 159 171
low_complexity n/a 167 178
disorder n/a 173 183
disorder n/a 204 225
low_complexity n/a 222 233
disorder n/a 240 241
disorder n/a 248 249
Pfam A Trigger_C 249 414
coiled_coil n/a 250 278
disorder n/a 252 253
low_complexity n/a 253 264
disorder n/a 256 270
disorder n/a 272 277
disorder n/a 330 336
disorder n/a 347 349
disorder n/a 364 373
low_complexity n/a 381 394
disorder n/a 384 385
disorder n/a 409 465

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9RT21. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAELISKEGN KVEFKVSVPA AEVNRAYDQV WAGLARDVRV PGFRPGKAPR
50
51
KVIENRVGKG YVESQVRDRL LETHYSQGLR ELGLNLVDAT VDPQDVQSGQ
100
101
AFEFTVKGET YPEVKLGDWQ GLKVSAQAPE ITDEVLEQTL SDLRERNASF
150
151
EKAERPIEAA DQVTIQELGE GDSEEGGSYP IYLDMAEEHV RNALLGKSAG
200
201
DVVDITVPAH QHGDHEHAEH TVRVKVVEVS SKKLQDLNDE FATSLNYESM
250
251
DKLRTDLREE LERRAQQEGD NLRREELVGH LVEGMTVEIP QALIDRRREG
300
301
MMSEIQDDLR RQGVQWKEYE AFMQEQGKLD EFEADLTKNA ETRVRRDLAL
350
351
EQLATDLNAQ VNEAEFNQTL MNLAQANGMN VQQLVQQLGQ DGVQSYYISL
400
401
LRERGLQRAL AQLSGEGQST EAASPKATGT EAAGTEQSEP AQTETAQNDA
450
451
GQTETAQSEG EQQSE                                      
465
 

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Checksums:
CRC64:475E073690C8E006
MD5:d6dfea6b5082c4e5a5023ee09c0781bc

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Trigger_N 10 - 109 2D3O 1 10 - 109 Jmol AstexViewer SPICE