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8  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL23_DEIRA (Q9RXK0)

Summary

This is the summary of UniProt entry RL23_DEIRA (Q9RXK0).

Description: 50S ribosomal protein L23
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) (NCBI taxonomy ID 243230)
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Length: 95 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L23 4 94
disorder n/a 64 67

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9RXK0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSHYDILQAP VISEKAYSAM ERGVYSFWVS PKATKTEIKD AIQQAFGVRV
50
51
IGISTMNVPG KRKRVGRFIG QRNDRKKAIV RLAEGQSIEA LAGQA     
95
 

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Checksums:
CRC64:09D8AA73699D6046
MD5:c6593a7d8be1af9a7a782e96d174e58f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L23 4 - 94 2D3O R 4 - 94 Jmol AstexViewer SPICE
2ZJP Q 4 - 94 Jmol AstexViewer SPICE
2ZJQ Q 4 - 94 Jmol AstexViewer SPICE
2ZJR Q 4 - 94 Jmol AstexViewer SPICE
3CF5 Q 4 - 94 Jmol AstexViewer SPICE
3DLL Q 4 - 94 Jmol AstexViewer SPICE
3PIO Q 4 - 94 Jmol AstexViewer SPICE
3PIP Q 4 - 94 Jmol AstexViewer SPICE