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Structure: 1N34

Summary

1n34
PDB entry 1n34: Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position
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PDB entry 1n34

Structure of the thermus thermophilus 30s ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position

Experiment type: Other, resolution 3.80Å
Release date: 2002-11-29
Authors: Ogle, J.M., Murphy IV, F.V., Tarry, M.J., Ramakrishnan, V.
Species: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579

PDBprint

Below is the PDBprint for entry 1n34.

External database links

Literature

BioLit references

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Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
B 10 226 RS2_THET8 10 226 Ribosomal_S2 (PF00318)
C 38 111 RS3_THET8 38 111 KH_2 (PF07650)
C 119 202 RS3_THET8 119 202 Ribosomal_S3_C (PF00189)
D 99 146 RS4_THET8 99 146 S4 (PF01479)
D 2 98 RS4_THET8 2 98 Ribosomal_S4 (PF00163)
E 5 71 RS5_THET8 5 71 Ribosomal_S5 (PF00333)
E 80 153 RS5_THET8 80 153 Ribosomal_S5_C (PF03719)
F 2 93 RS6_THET8 2 93 Ribosomal_S6 (PF01250)
G 2 149 RS7_THET8 2 149 Ribosomal_S7 (PF00177)
H 4 138 RS8_THET8 4 138 Ribosomal_S8 (PF00410)
I 8 128 RS9_THET8 8 128 Ribosomal_S9 (PF00380)
J 4 100 RS10_THET8 4 100 Ribosomal_S10 (PF00338)
K 17 126 RS11_THET8 17 126 Ribosomal_S11 (PF00411)
L 5 126 RS12_THET8 2 123 Ribosom_S12_S23 (PF00164)
M 3 109 RS13_THET8 3 109 Ribosomal_S13 (PF00416)
N 6 60 RS14Z_THET8 6 60 Ribosomal_S14 (PF00253)
O 6 88 RS15_THET8 6 88 Ribosomal_S15 (PF00312)
P 8 67 RS16_THET8 8 67 Ribosomal_S16 (PF00886)
Q 8 76 RS17_THET8 8 76 Ribosomal_S17 (PF00366)
R 28 79 RS18_THET8 28 79 Ribosomal_S18 (PF01084)
S 3 81 RS19_THET8 3 81 Ribosomal_S19 (PF00203)
T 8 90 RS20_THET8 8 90 Ribosomal_S20p (PF01649)

Note: This mapping was provided by the PDBe group.

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